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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015948791.1_cds_XP_016489953.1_80423
CDS Infomation

[gene=LOC107809778] [db_xref=GeneID:107809778] [protein=probable E3 ubiquitin-protein ligase ARI1] [protein_id=XP_016489953.1] [location=join(8790..8834,9764..9796,9885..10161,10610..10700,11602..12144,12948..12987)] [gbkey=CDS]
Sequence

ATGCCGTTGCCTATTGAACTGCGTTACTACAACAACAATAACCCAGTAATCAGGAAAGAG
TCCCTTTTAGCTGCACAGAAAGAAGACTTGCAAAGAGTGGACTTGCTATCTCTGAAGGAG
CATCATGCACGGAGCTTGCTTATTCATTATCGATGGGATGCTGACAAGGTCTTTGAGGTT
CTTGTTGAGAGAGGGAGAGATAAGTTATATGCTGAAGCGGGTGTGACACTGGAAGGAAAA
GATGATCATTGTTCCACTCTGTCGACAACTGAAATGACATGTCAAATTTGCTTCGAAGAT
GCCCCTGCTGAGAAGACTGCTGCAATGGACTGCAACCATAGATTTTGCAATGATTGTTGG
ACAACTCATTTCATTGTAAAGATAAATGAGGGTAAGAGTAAACGAATAACATGCATGGCC
CAAAAGTGCAATGCAATCAGTGCAATTTGGTTGTGTGGTGGAGCTACTGGTTTGGAACAC
ACATGGACTAGCATTCGAGGTCACACTTGTGGCAGTTACAAAGAAGGGCAAGAGAAAAAG
AAGACCGTCAACGATCTCTTACGCTTTACTCACTATTATGAGCGCCATGTGGCTCATATT
GGATCATTGAAGGTTGAAGCAGACATGAAACAAAAGCTACATGTAAAAGTCTTGAAACTT
GAATCGACAGAATTGCAATCAAAGGACTTCAGCTGGGCAGAAAATGGATTTAATAGACTC
CTTCAATCAAGACGGGTCCTCTCCTGTTCTTATCCAGTTGCATTTTACATATTTGGTAAG
GCACTGTTTGAGAACGAAATGACACCAAAAGAAAGAGAAATAAAGCAGAACCTTTTTGAG
AACCTGCAGCAGCAACTTGAAATAAATGTTGAAAGACTTTCAATGTTCTTGGGAGAGCCA
TTTGCTGACTATCCTGAAGATAAGCTTTTGGAGACTAAAATGAAGATCATCACTCTCTCT
TCAGTAACAGACAACCTCTGCAAAAAGTTGTATGATTGCATTGATAATGATTTGCTGGTT
CCTCTATAG

Peptide Sequence

PEP ID

XP_016489953.1
PEP Infomation

PREDICTED: probable E3 ubiquitin-protein ligase ARI1 [Nicotiana tabacum]
Sequence

MPLPIELRYYNNNNPVIRKESLLAAQKEDLQRVDLLSLKEHHARSLLIHYRWDADKVFEV
LVERGRDKLYAEAGVTLEGKDDHCSTLSTTEMTCQICFEDAPAEKTAAMDCNHRFCNDCW
TTHFIVKINEGKSKRITCMAQKCNAISAIWLCGGATGLEHTWTSIRGHTCGSYKEGQEKK
KTVNDLLRFTHYYERHVAHIGSLKVEADMKQKLHVKVLKLESTELQSKDFSWAENGFNRL
LQSRRVLSCSYPVAFYIFGKALFENEMTPKEREIKQNLFENLQQQLEINVERLSMFLGEP
FADYPEDKLLETKMKIITLSSVTDNLCKKLYDCIDNDLLVPL

Transcript Sequence

Gene sequence data has not been registered.